scanpy
by scverse · GitHub
Single-cell analysis in Python. Scales to >100M cells.
⭐ Stars
2.5k
🍴 Forks
756
🔥 Trending
+7 this week
📜 License
BSD-3-Clause
Commercial use OK📅 Created
2017
🔄 Last commit
4 days ago
🏷️ Category
anndata
💻 Language
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📈 Star history
2026-07-072026-07-22
📄 About
Single-cell analysis in Python. Scales to >100M cells.
❓ Frequently asked questions
What is scanpy?
Single-cell analysis in Python. Scales to >100M cells.
Is scanpy open source?
scanpy is an open-source project. It is released under the BSD-3-Clause license.
Is scanpy free?
Yes. scanpy is free and open source — you can use, modify and self-host it.
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